CDS

Accession Number TCMCG057C10220
gbkey CDS
Protein Id XP_018451630.1
Location complement(join(42178683..42178754,42178834..42179468,42179564..42179715,42179800..42180003,42180086..42180166,42180254..42180294))
Gene LOC108822903
GeneID 108822903
Organism Raphanus sativus

Protein

Length 394aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018596128.1
Definition PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA-(apurinic or apyrimidinic site) lyase
KEGG_TC -
KEGG_Module M00296        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10772        [VIEW IN KEGG]
EC 4.2.99.18        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03410        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
GOs GO:0001650        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003906        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0004529        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005743        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008296        [VIEW IN EMBL-EBI]
GO:0008309        [VIEW IN EMBL-EBI]
GO:0008311        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016796        [VIEW IN EMBL-EBI]
GO:0016895        [VIEW IN EMBL-EBI]
GO:0019866        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCGATGTGAAGCTGGCCCTGATTTCGAGAAAAACGAGTTCAGAAAATGGTTTAGATCTCTCCTAGTTGAACGTGGTGGCTCCTTCTCTGACGTTTTCAGATCTAAACATCCTGAAAGGAGAGATGCATTCACATGTTGGTCTTCAAGTAGTGGAGCAGAACAGTTTAATTACGGTTCGAGAATTGATCATATTTTAGTTGCTGGACCATGCTTGCATGAAGAAGGAGATCAGCAGGGCCATAGTTTTTTAGCTTGTCATGTGAAGGAATGTGACATATTAACAGAGTACAAGCGGTTTAAGAATGAAACTGTGCCAACAAGGTGGAAAGGTGGATTGGGTGTGAAACTAAAGGGATCAGACCATGTACCTGTATTCACAAGTTTTGATGATTTGCCTGACATCCCCCAACACAGCACACCGCCTTTAGCTTCGAGATATCTTCCCATGATTTACGGTTTTCAGCAAACTCTTGCGTCAGTGTTAATGAAAAGACAAGCCAATGAGCAAGCCAAAGCCATTGAGGTATCATGTTCATCATCAAGTCAAAGTTGTGGAGAGATCTCTACAGTACCACTCAGAAACTGCAGCTTGACGGGTACTTCACCTGAGGAATCTTGCTCTTCGGAGAAAGAATCCACTGTGAGAGTAACCACCACATCTGGAGGCTCCACTAGTAACCTTAGTGATAGAATGTGTGTGTCATCTGTGAGAGCTGAGGATATCTCTAGAGATGGAAACAGGAAGAAAGTGAGGAGGATCCAATCTTCTTCTCAACAGCTTTCTCTAAAGTCCTTTTTCACTTCTAAATCACCTTCAAATTTTTCCTCAAGCCAGAGCTCCTCCCAAGGAGAGAGCATCACAGAACCGACTGTTTCCGGCAAAGAAGACGATGAACTTACTACTACTTCATCACAGGAACAAGATCAAAGCGGTTCATCTACTAAACAGAAAAACGATGCAGCATTAATGGAGTGGCAGAGAATACAGAACCTTATGCGAAACAGCATACCTCTCTGCAAAGGACACAAAGAAGCTTGTGTAGCTCGGGTTGTAAAGAAACCAGGTCCCACATTTGGACGCAGATTCTACGTCTGCTCTCGTGCTGAGGGACCTTCCTCTAATCCAGAAGCAAACTGTGGTTATTTCAAATGGGCTTCATCCAAATTCCGAGACAAGTGA
Protein:  
MDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRSKHPERRDAFTCWSSSSGAEQFNYGSRIDHILVAGPCLHEEGDQQGHSFLACHVKECDILTEYKRFKNETVPTRWKGGLGVKLKGSDHVPVFTSFDDLPDIPQHSTPPLASRYLPMIYGFQQTLASVLMKRQANEQAKAIEVSCSSSSQSCGEISTVPLRNCSLTGTSPEESCSSEKESTVRVTTTSGGSTSNLSDRMCVSSVRAEDISRDGNRKKVRRIQSSSQQLSLKSFFTSKSPSNFSSSQSSSQGESITEPTVSGKEDDELTTTSSQEQDQSGSSTKQKNDAALMEWQRIQNLMRNSIPLCKGHKEACVARVVKKPGPTFGRRFYVCSRAEGPSSNPEANCGYFKWASSKFRDK